Michael Davies Awarded IoP CPG Thesis Prize

First prize for this year’s 2023 IoP CPG Thesis Prize has been awarded to Michael Davies, University College London and University of Cambridge. Michael’s thesis, titled Solving mysteries of ice formation with simulation and data-driven methods, applied molecular dynamics simulations and machine learning techniques to understand ice formation at the molecular level.

The transition of water (left) to ice (right) is much rarer and more complex than one might expect.

At first glance the formation of ice might seem a mundane everyday phenomenon. But its impacts are vast, ranging from glaciers, to cryopreservation, to climate modelling. And its formation is perplexing: in its pure state water must be cooled to around -40 °C for ice to form and a foreign material is almost always required. To understand how materials control ice formation, Michael used high-throughput computational simulations in combination with deep learning. The work uncovered a path to an elusive “cubic ice” polymorph and produced an AI model that beat experts from across the globe in an open head-to-head challenge despite 80 years of human endeavour. Michael also investigated the formation of “amorphous ice”, which is believed to be the most common form of water in the universe. In collaboration with experiment, he discovered a new form of amorphous ice with the same density as liquid water. The discovery raises questions about the very nature of liquid water.

We look forward to reading more about Michael’s work in the next IoP Computational Physics Group Newsletter. In the meantime, Michael’s thesis is available online.

Dimitrios Bachtis Awarded IoP CPG Thesis Prize

Second prize for this year’s 2023 IoP CPG Thesis Prize has been awarded to Dimitrios Bachtis, Swansea University. Dimitrios’s thesis, titled Quantum field-theoretic machine learning and the renormalization group, explores the derivation of neural networks from quantum field theories and utilizes machine learning techniques to study phase transitions.

Mapping an original image to a quantum field theory which acts as a machine learning algorithm. As the quantum field theory equilibrates from a randomly initialised image, the picture of the bird emerges as an equilibrium configuration.

An indispensable tool in the study of phase transitions is the renormalization group, which investigates how a system changes when viewed at different scales. The application of a renormalization group transformation can be intuitively understood as the “zooming out” of a map: as the image becomes smaller some of the fine details within the map have disappeared. Dimitrios explored how machine learning algorithms enable an approximate inversion of the renormalization group which, analogously to the previous example, can be understood as the “zooming in” where new fine details are now introduced by the machine learning algorithm. The method opens up the opportunity to conduct high precision computational studies of phase transitions. Dimitrios additionally investigated the derivation of neural networks from quantum field theories via the use of the Hammersley-Clifford theorem, thus establishing a mathematically rigorous connection between quantum field theory, machine learning, and probability theory.  

We look forward to reading more about Dimitrios’ work in the next IoP Computational Physics Group Newsletter. In the meantime, Dimitrios’ thesis is available online.

2023 PhD Thesis Prize: Now open for nominations

This year’s PhD Thesis Prize is now accepting nominations. The Committee of the Institute of Physics Computational Group offers an annual prize for the author of the PhD thesis that, in the opinion of the Committee, contributes most strongly to the advancement of computational physics.

The prize submission deadline of 30 April 2023. More information can be found on the CPG page.

Nominations can be made by emailing t.shendruk@ed.ac.uk:

  • a four-page (A4) abstract
  • a one-page (A4) citation from the PhD supervisor
  • a one-page (A4) confidential report from the external thesis examiner

Quantum in the Summer

The Computational Physics Group are proud to announce our sponsorship of Bristol University’s Quantum in the Summer.

Quantum Summer School for students aged 16+, 31st July – 4th August 2023, Bristol

In 2023 Bristol University will host the ninth annual free-to-attend Quantum In The Summer (QITS) school for students aged 16 and over. The intensive week-long summer school will run from 31 st July – 4 th August and aims to teach students about quantum mechanics and light, incorporating both theoretical and experimental workshops. Students will participate in introductory quantum lectures, a careers panel, the opportunity to carry out optical experiments, and more. The week also offers a range of exciting icebreaker social activities around Bristol. More information is available on the website: https://www.bristol.ac.uk/qet-labs/outreach/quantum-summer/ or via email: quantum-summer@bristol.ac.uk.

Zafiirah Hosenie Awarded IoP CPG Thesis Prize

First prize for this year’s 2022 IoP CPG Thesis Prize has been awarded to Zafiirah Hosenie, University of Manchester. Zafiirah’s thesis, titled Feature Detection and Classification in streaming and non-streaming astronomical datasets, applied machine learning techniques to the challenges that arise from the large, streaming, data volumes that are prevalent in modern Astronomy.

Fast Radio Burst Intelligent Distinguisher (FRBID) is a machine learning model designed to filter out the so called Radio Frequency Interference (RFI) detections from true astrophysical sources (single pulses (SP) or fast radio bursts (FRB)) for real-time classification of candidates. The performance of FRBID shows a false positive rate of less than 1%. To-date, FRBID has detected more than half a dozen new single pulse candidates.

When classifying astronomical source types to their observed variations in brightness, there exists an imbalance: There are many class types that are rare but potentially quite interesting. Zafiirah enacted a rigorous statistical analysis of the features used to identify these systems, and developed novel machine learning approaches to deal with the class imbalance. Additionally, she worked with the real-time transient pipeline of the MeerLICHT telescope to resolve the problem of distinguishing between real transients and ‘bogus’ ones. Time-domain astrophysics, studying transient and variable stars, also allows astronomers to explore the Universe from a new perspective, and the algorithms Zafiirah developed have been successfully deployed at the MeerKAT radio telescope array and the MeerLICHT optical telescope, both in South Africa.

We look forward to reading more about Zafiirah’s work in the next IoP Computational Physics Group Newsletter. In the meantime, Zafiirah’s thesis is available online.

Mary Coe Awarded IoP CPG Thesis Prize

Second prize for this year’s 2022 IoP CPG Thesis Prize has been awarded to Mary Coe, University of Bristol. Mary’s thesis, titled Hydrophobicity Across Length Scales: The Role of Surface Criticality, employed Monte Carlo simulations and density function theory to elucidating the behaviour of water near a hydrophobic solid surface. Despite its ubiquity in everyday life and in many scientific disciplines, the underlying physical mechanism relating hydrophobicity on the microscopic scale to hydrophobicity on macroscopic length scales has remained a difficult problem. Mary studied density depletion and enhanced fluctuations in the vicinity of the drying critical point for several fluid-fluid and fluid-solid interactions near curved surfaces, and so extended her work beyond hydrophobicity to consider more generally solvophobicity. Mary’s results provide strong numerical evidence that the mechanism underlying both hydrophobicity and solvophobicity across microscopic and macroscopic length scales is a drying surface critical point.

Cross-sections through the centre of simulation boxes containing particle of radius Rs, given in terms of the diameter of a monatomic water particle σmw, show the formation of fluctuating ‘nanobubbles’ across the solute surface as the solute size increases. There is debate within experimental work about the formation of the vapour layer – Mary’s simulations favoured the nano bubble view.

We look forward to reading more about Mary’s work in the next IoP Computational Physics Group Newsletter. In the meantime, Mary’s thesis is available online.

Upcoming event: Fortran Specialist Group AGM – 2022 and joint IoP/BCS Conference

Date of event 29 September 2022. Location UCL, London/Online.

The Fortran SG AGM will be on the 29th September, followed by an afternoon of presentations held jointly with the IOP Computational Physics Group.  While both are hybrid events, you are still required to book even if not physically attending as the Zoom link will be distributed by the booking mechanism.

We are always seeking new and enthusiastic members for the committee and if this interests you please let the group secretary know on or before the 22nd September.  The secretary is Sam Ellis <sam.ellis@bcs.org.uk>.  

There are three talks in the afternoon, each allocated 50min with gaps for refreshments/breaks. Lunch will not be provided but we hope to have soft drinks & nibbles for the afternoon talks.

Schedule for the day (Times are London local, BST)

* AGM (10:30 – 12:00)
* Lunch break / Networking (12:00 – 14:00) – NB Lunch will *not* be provided but there are many restaurants/pubs in the vicinity
* Afternoon Talks (14:00 – 17:00) – Jointly held with the IoP Computational Physics group.

Talks running order (titles may be refined nearer the date):

* The new features of Fortran 2023 – John Reid (RAL)
* Nvidia Fortran Compiler – Getting Fortran onto GPUs – Jeff Larkin & Jeff Hammond (Nvidia)
* Fortran Lang Projects – FPM & others – Laurence Kedward (Bristol University)

Further details here:  https://fortran.bcs.org/futurevents.php
          Booking link:  https://29september2022fortran.eventbrite.co.uk/

Hybrid meeting Machine Learning for Healthcare, 21 November 2022, London, England: Call for Abstracts

Join us for the Machine Learning for Healthcare hybrid meeting by the Institute of Physics Medical Physics and Computational Physics Groups at the IOP Headquarters in London, King’s Cross, on Monday 21st of November 2022.

Machine learning is a game changing technology with the potential to revolutionise a wide range of healthcare applications. Early diagnosis and treatment are vital in improving overall patient outcomes. By automating and expediting imaging and treatment planning, machine learning in healthcare is a promising solution that can assist in meeting the demands of today’s growing workload. Developing, validating, and integrating new machine learning tools within the healthcare current infrastructure is not without challenges however. Storage, sharing, and privacy of patient health information are just some of the key issues.

Researchers from both academia and industry and healthcare practitioners are invited to participate in this one-day meeting. With an exciting line-up of invited speakers, the aim is to review the latest developments, benefits, and challenges of integrating machine learning into healthcare practice.

How to submit an abstract (deadline 16th September 2022) and/or register can be found at the conference webpage https://iop.eventsair.com/mlh2022

Summer school Quantum in the Summer, 1-5 August 2022, Bristol, UK

Quantum in the Summer is a free, week-long summer school for sixth form students introducing them to important concepts in quantum physics, as a taster for what it’s like to study physics at university. It includes theory talks, hands on experiments, lab tours, and evening social activities. This year it will run from 1-5 August. You can find more information on the website: http://www.bristol.ac.uk/qet-labs/outreach/quantum-summer/, or by email at quantum-summer@bristol.ac.uk.

Conference on Motility in Microbes, Molecules and Matter, 6-7 December 2021, London, England

Image credit: Esinam Dake, Loughborough University
Living systems are continually in active motion. From global scale migration down to enzymatic conformational transitions and kinetic action, living systems self-organize by moving. Moreover, motility as a response to stimuli is a key strategy by which living organisms capitalize on opportunities and combat threats. Motion is then a characteristic hallmark of biological complexity; however, it is also fundamentally physical. This has made studying motility one of the most fruitful points of collaboration between biologists and physicists, and remains an exciting frontier for both groups.This workshop aims to stimulate new collaborative partnerships between experimental biologists and computational physicists. The programme is organized jointly by the IOP Biological and Computational Physics Groups and seeks to address: Biological questions that have yet to receive sufficient attention from computational modellers; Emerging numerical approaches with potential for simulating biological motions.

More details can be found at the conference webpage:
http://mmmm2021.iopconfs.org/home